ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0402079
Analysis Project Name Prefix Enriched cells of cold seep sediment from Santa Monica Basin, California, United States - ANME aggregate JGI_Orphan.7059.BNCT.2.C8
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID 222684
Completion Status Complete
IMG Completion Date 2019-11-18
PI Victoria Orphan
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
Scaffold Count 270
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2610
Estimated Size 2414987
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-10-04
Last Modified By JGI automated process on 2020-02-26
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300036258
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Enriched cells of cold seep sediment from various locations in Pacific Ocean
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1258130 (Portal)
ITS Analysis Project Name ANME aggregate JGI_Orphan.7059.BNCT.2.C8
ITS Analysis Product Name Amplified, Targeted, Cell Enrichment
ITS Version Number 1

 

 

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