ANALYSIS PROJECT INFORMATION | |
---|---|
GOLD Analysis Project ID
![]() |
Ga0401698 |
Analysis Project Name Prefix |
Environmental water column metatranscriptomes combined assembly |
Analysis Project Name Suffix
![]() |
|
Analysis Project Type
![]() |
Combined Assembly |
IMG Submission ID
![]() |
234126 |
Completion Status |
Complete |
IMG Completion Date
![]() |
2020-05-22 |
PI | Steven Wilhelm |
Analysis Project Description
![]() |
|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
![]() |
megahit v. 2020-05-03 00:07:09 - MEGAHIT v1.2.9 |
IMG Decontamination
![]() |
|
IMG Decontamination Method
![]() |
|
Scaffold Count
![]() |
2948895 |
Contig Count
![]() |
|
Gene Calling Method
(MIGS-32)
![]() |
|
Gene Count |
4073689 |
Estimated Size |
2762866098 |
Sequencing Depth
(MIGS-31.1)
![]() |
|
Annotation Pipeline |
IMG Annotation Pipeline v.5.0.15 |
Added By |
JGI automated process
on 2019-09-26 |
Last Modified By |
JGI automated process
on 2020-12-05 |
ORF Comparison Tools
![]() |
|
16S Recovered
![]() |
|
16S Recovery Software
![]() |
|
PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
![]() |
3300039354 |
Genbank Accession
![]() |
|
Genbank Release Date |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Seawater microbial communities from the Antarctic Ocean |
Number of Studies
![]() |
1 |
Number of Biosamples
![]() |
22 |
Number of Projects
![]() |
22 |
Number of Related Analysis Projects
![]() |
44 |
Derived Analysis Projects (DAP)
![]() |
1 |
JGI INFORMATION | |
ITS Analysis Project ID
![]() |
1260737 (Portal) |
ITS Analysis Project Name
![]() |
Environmental water column metatranscriptomes combined assembly |
ITS Analysis Product Name
![]() |
Co-Assembly - Metagenome Metatranscriptome |
ITS Version Number |
1 |
You are going to add the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the AP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Changing the AP visibility will also change downgrade visibility on the following items:
Do you want to continue with this visibility change?