ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0401275
Analysis Project Name Prefix FICUS49499 Metatranscriptome Norway combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 221652
Completion Status Complete
IMG Completion Date 2020-03-11
PI Petr Baldrian
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination
IMG Decontamination Method
Scaffold Count 6348509
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 9875564
Estimated Size 5659788480
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.13
Added By JGI automated process on 2019-09-16
Last Modified By JGI automated process on 2020-03-13
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037849
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil, plant litter and rhizosphere microbial communities from European coniferous forests
Number of Studies 1
Number of Biosamples 80
Number of Projects 80
Number of Related Analysis Projects 86
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1259296 (Portal)
ITS Analysis Project Name FICUS49499 Metatranscriptome Norway combined assembly
ITS Analysis Product Name Co-Assembly - Metagenome Metatranscriptome
ITS Version Number

 

 

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