ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0401204 |
Analysis Project Name Prefix |
Mangrove combined assembly |
Analysis Project Name Suffix
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|
Analysis Project Type
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Combined Assembly |
IMG Submission ID
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245253 |
Completion Status |
Complete |
IMG Completion Date
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2020-12-25 |
PI | Brandi Reese |
Analysis Project Description
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|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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MetaHipMer v. version 1.2.2.26-ga5b7efdd-dirty |
IMG Decontamination
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|
IMG Decontamination Method
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|
Scaffold Count
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31649817 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
52762524 |
Estimated Size |
33347116427 |
Sequencing Depth
(MIGS-31.1)
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|
Annotation Pipeline |
IMG Annotation Pipeline v.5.0.20 |
Added By |
JGI automated process
on 2019-09-13 |
Last Modified By |
JGI automated process
on 2020-12-28 |
ORF Comparison Tools
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|
16S Recovered
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|
16S Recovery Software
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|
PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300042731 |
Genbank Accession
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|
Genbank Release Date |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Sediment microbial communities from coastal wetland in Texas, United States |
Number of Studies
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1 |
Number of Biosamples
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45 |
Number of Projects
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45 |
Number of Related Analysis Projects
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45 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
ITS Analysis Project ID
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1259176 (Portal) |
ITS Analysis Project Name
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Mangrove combined assembly |
ITS Analysis Product Name
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Combined Assembly |
ITS Version Number |
1 |
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