ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0401204
Analysis Project Name Prefix Mangrove combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 245253
Completion Status Complete
IMG Completion Date 2020-12-25
PI Brandi Reese
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MetaHipMer v. version 1.2.2.26-ga5b7efdd-dirty
IMG Decontamination
IMG Decontamination Method
Scaffold Count 31649817
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 52762524
Estimated Size 33347116427
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2019-09-13
Last Modified By JGI automated process on 2020-12-28
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300042731
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from coastal wetland in Texas, United States
Number of Studies 1
Number of Biosamples 45
Number of Projects 45
Number of Related Analysis Projects 45
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1259176 (Portal)
ITS Analysis Project Name Mangrove combined assembly
ITS Analysis Product Name Combined Assembly
ITS Version Number 1

 

 

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