Studies
|
56,122 |
|
Biosamples
|
195,527 |
|
Sequencing Projects
|
519,932 |
|
Analysis Projects
|
381,637 |
| Organisms | 480,441 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0400238 |
| Analysis Project Name |
Soil microbial communities from Duke University greenhouse, North Carolina, United States - NS_N_2 noSuillus Nitrogen |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
223933 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2020-02-06 |
| PI | Jennifer Bhatnagar |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
metaspades v. 3.13.0 |
|
Scaffold Count
|
1241610 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
1983611 |
| Estimated Size |
1100581234 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.10 |
| Added By | JGI automated process on 2019-08-28 |
| Last Modified By | JGI automated process on 2022-06-18 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300037474 |
| IMG Metagenome bin count |
4 |
| IMG Predicted viruses |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Soil microbial communities from Duke University greenhouse, North Carolina, United States |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
1 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Restricted |
|
ITS Analysis Project ID
|
1254166 (Portal) |
|
ITS Analysis Project Name
|
NS_N_2 soil metagenome noSuillus Nitrogen |
|
ITS Analysis Product Name
|
Metagenome Standard Draft |
| ITS Version Number |
1 |
|
Library Names
|
GTBGX |
|
JGI Award DOI
|
10.46936/fics.proj.2017.49989/60006231 |
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