ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0399779
Analysis Project Name Prefix 'Catharanthus roseus' aster yellows phytoplasma De Villa
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 220628
Completion Status Complete
IMG Completion Date 2019-09-18
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.10.1
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 2
Contig Count 2
Gene Calling Method (MIGS-32)
Gene Count 636
Estimated Size 603949
Sequencing Depth (MIGS-31.1) 50.0x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-08-20
Last Modified By JGI automated process on 2019-09-30
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2837261770
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID CP035950 (GCA_004214875.1)
Release Date 2019-02-22
NCBI Genbank Version CP035950.1
Genbank ID CP035949 (GCA_004214875.1)
Release Date 2019-02-22
NCBI Genbank Version CP035949.1
Genbank Release Date 2019-02-22
ANALYSIS PROJECT COMPOSITION
Study 'Catharanthus roseus' aster yellows phytoplasma De Villa genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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