ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0397721
Analysis Project Name Lachnospiraceae bacterium GAM79
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 292539
Completion Status Complete
IMG Completion Date 2023-02-01
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP Assembly v. 3.0; Pilon v. 1.18
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 1
Contig Count 1
Gene Calling Method (MIGS-32)
Gene Count 3993
Estimated Size 4078671
Sequencing Depth (MIGS-31.1) 124x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.13
Added By JGI automated process on 2019-08-20
Last Modified By JGI automated process on 2023-02-13
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3000245376
Genbank Accession
Genbank ID AP018536 (GCA_003584705.1)
Release Date 2018-09-22
NCBI Genbank Version AP018536.1
Genbank Release Date 2018-09-22
ANALYSIS PROJECT COMPOSITION
Study Conventional culture methods with commercially available media unveil the presence of novel culturable bacteria; Whole genome sequencing of novel bacterial isolates
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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