Studies
|
56,334 |
|
Biosamples
|
196,986 |
|
Sequencing Projects
|
525,358 |
|
Analysis Projects
|
385,008 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |||||||
|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0396000 |
||||||
| Analysis Project Name |
Butyricicoccus sp. GAM44 |
||||||
|
Analysis Project Name Suffix
|
|
||||||
|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||||
|
IMG Submission ID
|
220742 | ||||||
| Completion Status |
Complete |
||||||
|
IMG Completion Date
|
2019-10-04 |
||||||
| PI | Unknown | ||||||
|
Analysis Project Description
|
Submitting a public genome from NCBI/GenBank to IMG for analysis. |
||||||
| Visibility | Public | ||||||
| ANALYSIS PROJECT METADATA | |||||||
|
Assembly Method
(MIGS-30)
|
HGAP Assembly v. 3.0; Canu v. 1.4; minimapv. 0.2-r124; racon v. 1.1.0; circlator v. |
||||||
|
IMG Decontamination
|
No |
||||||
|
IMG Decontamination Method
|
|
||||||
|
Scaffold Count
|
4 |
||||||
|
Contig Count
|
4 |
||||||
|
Gene Calling Method
(MIGS-32)
|
|
||||||
| Gene Count |
2827 |
||||||
| Estimated Size |
2949183 |
||||||
|
Sequencing Depth
(MIGS-31.1)
|
250x |
||||||
| Genbank Anomalous Assembly |
Yes |
||||||
| Genbank Anomalous Reason |
unverified source organism |
||||||
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.3 |
||||||
| Added By | JGI automated process on 2019-08-15 | ||||||
| Last Modified By | JGI automated process on 2019-11-01 | ||||||
|
ORF Comparison Tools
|
|
||||||
| PROJECT EXTERNAL REFERENCES | |||||||
|
IMG Taxon ID
|
2840010843 |
||||||
|
Genbank Accession
|
|
||||||
| Genbank Release Date |
2018-06-13 |
||||||
| ANALYSIS PROJECT COMPOSITION | |||||||
| Study |
Conventional culture methods with commercially available media unveil the presence of novel culturable bacteria; Whole genome sequencing of novel bacterial isolates |
||||||
|
Number of Studies
|
1 |
||||||
|
Number of Projects
|
1 |
||||||
|
Number of Related Analysis Projects
|
0 |
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