ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395974
Analysis Project Name Prefix Rhodococcus sp. OAS809
Analysis Project Name Suffix (Illumina draft)
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 221402
Completion Status Complete
IMG Completion Date 2019-09-18
PI Trent Northen
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 23
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 7023
Estimated Size 7264212
Sequencing Depth (MIGS-31.1) 206x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-08-14
Last Modified By JGI automated process on 2021-06-03
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2838279068
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID JADBDV000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Enriched cells from switchgrass and soil in EcoFAB chamber, Walnut Creek, California, United States
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1252186 (Portal)
ITS Analysis Project Name Rhodococcus sp. OAS809 (Illumina draft)
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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