ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395966
Analysis Project Name Prefix Sphingopyxis sp. OAS728
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 221399
Completion Status Complete
IMG Completion Date 2019-09-18
PI Trent Northen
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4688
Estimated Size 4919217
Sequencing Depth (MIGS-31.1) 305x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-08-14
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2838266616
Genbank Accession
Genbank ID JADBDT000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Enriched cells from switchgrass and soil in EcoFAB chamber, Walnut Creek, California, United States
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1252168 (Portal)
ITS Analysis Project Name Sphingopyxis sp. OAS728
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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