ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395950
Analysis Project Name Prefix Sphingomonas sp. OAE895
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 221388
Completion Status Complete
IMG Completion Date 2019-09-18
PI Trent Northen
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 11
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3037
Estimated Size 3016632
Sequencing Depth (MIGS-31.1) 497x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-08-14
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2838224270
Genbank Accession
Genbank ID JADBDK000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Enriched cells from switchgrass and soil in EcoFAB chamber, Walnut Creek, California, United States
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1252136 (Portal)
ITS Analysis Project Name Sphingomonas sp. OAE895
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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