ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395806
Analysis Project Name Prefix Sediment microbial communities from uranium-contaminated floodplain near Riverton, Wyoming, United States - RVTP2_091317_139_150
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 224332
Completion Status Complete
IMG Completion Date 2020-01-31
PI Kristin Boye
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
Scaffold Count 2108200
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4326483
Estimated Size 2868977099
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.10
Added By JGI automated process on 2019-08-14
Last Modified By Supratim Mukherjee on 2021-07-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037424
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from uranium-contaminated floodplain near Riverton, Wyoming, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1249141 (Portal)
ITS Analysis Project Name RVTP2_091317_139_150 metagenome
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1

 

 

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