ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395804
Analysis Project Name Prefix Sediment microbial communities from uranium-contaminated floodplain near Riverton, Wyoming, United States - RVTP2_091317_115_130
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 223940
Completion Status Complete
IMG Completion Date 2020-02-06
PI Kristin Boye
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
Scaffold Count 1647225
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3188649
Estimated Size 2060420495
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.11
Added By JGI automated process on 2019-08-14
Last Modified By Supratim Mukherjee on 2021-07-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037470
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from uranium-contaminated floodplain near Riverton, Wyoming, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1249137 (Portal)
ITS Analysis Project Name RVTP2_091317_115_130 metagenome
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1

 

 

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