ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395790
Analysis Project Name Prefix Sediment microbial communities from uranium-contaminated floodplain near Riverton, Wyoming, United States - RVT2_Jul25_78_v
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 230267
Completion Status Complete
IMG Completion Date 2020-03-27
PI Kristin Boye
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
Scaffold Count 1729632
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3295635
Estimated Size 2089393033
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.14
Added By JGI automated process on 2019-08-14
Last Modified By Supratim Mukherjee on 2021-07-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300038406
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from uranium-contaminated floodplain near Riverton, Wyoming, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1249109 (Portal)
ITS Analysis Project Name RVT2_Jul25_78_v metagenome
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1

 

 

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