ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395786
Analysis Project Name Prefix Sediment microbial communities from uranium-contaminated floodplain near Riverton, Wyoming, United States - RVT2_Jul25_5_f
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 243856
Completion Status Complete
IMG Completion Date 2020-11-30
PI Kristin Boye
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.14.1
Scaffold Count 2710298
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4463823
Estimated Size 2552668048
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2019-08-14
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300042192
IMG Metagenome bin count 8
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from uranium-contaminated floodplain near Riverton, Wyoming, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1249101 (Portal)
ITS Analysis Project Name RVT2_Jul25_5_f metagenome
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1

 

 

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