ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395515
Analysis Project Name Prefix Thiotricheae bacterium A1462
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID 217683
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession SAMN09006833
Completion Status Incomplete
Completion Date
PI Yuanning Li
Description Submitting an public MAG from NCBI to IMG
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Thiotricheae bacterium A1462
NCBI Taxonomy ID 135617
Phylum PROTEOBACTERIA-GAMMA
Phylogeny Suggestion
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Assembly Method (MIGS-30)
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count
Contig Count
Binning Method BLASTx, Quast 4.5
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Supratim Mukherjee on 2019-08-05
Last Modified By JGI automated process on 2019-08-06
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Genbank ID QFXE00000000 (GCA_003349915.1)
Assembly Accession GCA_003349915.1
SRA Runs
MAG Publication 12(11):2785-2795 Endosymbiont genomes yield clues of tubeworm success.
ANALYSIS PROJECT COMPOSITION
Study Tubeworm host-associated microbial communities from Mississippi Canyon, USA
Source Analysis Project Tubeworm host-associated microbial communities from cold seep in Mississippi Canyon, USA - Escarpia spicata
Derived Analysis Projects 0

 

 

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