ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395513
Analysis Project Name Prefix Thiotricheae bacterium A1464
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID 217681
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession SAMN09006835
Completion Status Complete
IMG Completion Date 2019-09-18
PI Yuanning Li
Description Submitting an public MAG from NCBI to IMG
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Thiotricheae bacterium A1464
NCBI Taxonomy ID 135617
Phylum PROTEOBACTERIA-GAMMA
Phylogeny Suggestion
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Assembly Method (MIGS-30)
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 14
Contig Count
Binning Method BLASTx, Quast 4.5
Gene Calling Method (MIGS-32)
Gene Count 3539
Estimated Size 3770634
Sequencing Depth (MIGS-31.1)
Contamination Percentage
Completeness Percentage
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By Supratim Mukherjee on 2019-08-05
Last Modified By JGI automated process on 2019-09-30
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2835551090
IMG RNA-Seq ID
Genbank
Genbank ID QFXC00000000 (GCA_003349885.1)
Assembly Accession GCA_003349885.1
Genbank Release Date
SRA Runs
MAG Publication 12(11):2785-2795 Endosymbiont genomes yield clues of tubeworm success.
ANALYSIS PROJECT COMPOSITION
Study Tubeworm host-associated microbial communities from Mississippi Canyon, USA
Source Analysis Project Tubeworm host-associated microbial communities from cold seep in Mississippi Canyon, USA - Galathealinum brachiosum
Derived Analysis Projects 0

 

 

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