ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0394679
Analysis Project Name Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO6 v2
Analysis Project Name Stem Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO6
Analysis Project Name Suffix v2
Analysis Project Type Metagenome Analysis
IMG Submission ID 215675
Completion Status Complete
IMG Completion Date 2020-03-31
PI Magdalena Osburn
Analysis Project Description Metagenome assembled from microbial DNA extracted from 10L of subsurface aquifer fluids collected 4850 feet below surface from DeMMO6 borehole.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Megahit v. 1.0.6.1
Scaffold Count 116229
Contig Count 116229
Gene Calling Method (MIGS-32)
Gene Count 462397
Estimated Size 399721960
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.14
Added By Caitlin Casar on 2019-07-15
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300038436
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0

 

 

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