ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0394678
Analysis Project Name Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO5 v2
Analysis Project Name Stem Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO5
Analysis Project Name Suffix v2
Analysis Project Type Metagenome Analysis
IMG Submission ID 215674
Completion Status Complete
IMG Completion Date 2020-03-19
PI Magdalena Osburn
Analysis Project Description Metagenome assembled from microbial DNA extracted from 10L of subsurface aquifer fluids collected 4850 feet below surface from DeMMO5 borehole.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Megahit v. 1.0.6.1
Scaffold Count 59184
Contig Count 59184
Gene Calling Method (MIGS-32)
Gene Count 198268
Estimated Size 156981017
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.13
Added By Caitlin Casar on 2019-07-15
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037880
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0

 

 

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