ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0394676
Analysis Project Name Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO3 v2
Analysis Project Name Stem Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO3
Analysis Project Name Suffix v2
Analysis Project Type Metagenome Analysis
IMG Submission ID 215672
Completion Status Complete
IMG Completion Date 2020-03-31
PI Magdalena Osburn
Analysis Project Description Metagenome assembled from microbial DNA extracted from 10L of subsurface aquifer fluids collected 2000 feet below surface from DeMMO3 borehole.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Megahit v. 1.0.6.1
Scaffold Count 97280
Contig Count 97280
Gene Calling Method (MIGS-32)
Gene Count 353553
Estimated Size 295696572
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.14
Added By Caitlin Casar on 2019-07-15
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300038466
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0

 

 

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