ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0394674
Analysis Project Name Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO1 v2
Analysis Project Name Stem Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO1
Analysis Project Name Suffix v2
Analysis Project Type Metagenome Analysis
IMG Submission ID 215669
Completion Status Complete
IMG Completion Date 2020-03-30
PI Magdalena Osburn
Analysis Project Description Metagenome from microbial DNA extracted from 10L of subsurface aquifer fluids collected 800 feet below surface from DeMMO1 borehole.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Megahit v. 1.0.6.1
Scaffold Count 46877
Contig Count 46877
Gene Calling Method (MIGS-32)
Gene Count 133337
Estimated Size 101584177
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.14
Added By Caitlin Casar on 2019-07-15
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300038438
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0

 

 

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