ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0394514
Analysis Project Name Prefix Epsilonproteobacteria bacterium SCGC AD-311-F16
Analysis Project Name Suffix decontaminated
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 219208
Completion Status Complete
IMG Completion Date 2019-11-12
PI Steven J. Hallam
Description Marine pelagic microbial single-cell genomes from the Northastern Subarctic Pacific Ocean (NESAP) and Saanich Inlet, Strait of Georgia, Northeast Pacific Ocean
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Spades v.3.9
IMG Decontamination
IMG Decontamination Method
Scaffold Count 45
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1853
Estimated Size 1147743
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By Alvaro M. Plominsky on 2019-07-12
Last Modified By JGI automated process on 2019-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2841926431
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Single-cell microbial genomes from expanding oxygen minimum zones (OMZs) of the northeastern subarctic Pacific Ocean (NESAP)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 2

 

 

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