ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0394397
Analysis Project Name Prefix Rhizobium esperanzae VC28
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 221119
Completion Status Complete
IMG Completion Date 2019-09-18
PI William Whitman
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 31
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6056
Estimated Size 6208656
Sequencing Depth (MIGS-31.1) 242x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-07-06
Last Modified By JGI automated process on 2020-02-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2838068647
IMG RNA-Seq ID
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome sequencing to study the core and pangenomes of soil and plant-associated prokaryotes
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1244305 (Portal)
ITS Analysis Project Name Rhizobium esperanzae VC28
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number

 

 

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