Studies
|
56,036 |
|
Biosamples
|
191,586 |
|
Sequencing Projects
|
515,942 |
|
Analysis Projects
|
381,633 |
| Organisms | 480,439 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0393702 |
| Analysis Project Name |
Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Xylan, Gen9, Rep 3 (Eukaryote Community Metatranscriptome Expression - Self) |
| Analysis Project Name Stem |
Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Xylan, Gen9, Rep 3 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metatranscriptome mapping (self) |
|
IMG Submission ID
|
225360 |
| Completion Status |
Incomplete |
|
IMG Completion Date
|
|
| PI | Michelle O'Malley |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
|
|
Scaffold Count
|
|
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
|
| Estimated Size |
|
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
|
| Added By | JGI automated process on 2019-06-10 |
| Last Modified By | JGI automated process on 2022-05-25 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
|
| IMG RNA-Seq ID |
9459 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Determining the genomic basis for interactions between gut fungi and methanogenic archaea |
|
Number of Projects
|
1 |
| Reference Analysis Project |
Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Xylan, Gen9, Rep 3 (Eukaryote Community Metatranscriptome) |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1242733 (Portal) |
|
ITS Analysis Project Name
|
Goat fecal pellet Enrichment Culture - Xylan, Gen9, Rep 3 Expression - Self |
|
ITS Analysis Product Name
|
Eukaryote Community Metatranscriptome Expression - Self |
| ITS Version Number |
1 |
|
Library Names
|
|
|
JGI Award DOI
|
10.46936/10.25585/60001061 |
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