ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0393563
Analysis Project Name Prefix Sorted cell/s from microbial mat in Mushroom Spring, Yellowstone National Park, Wyoming, United States - Uncultured microbe JGI_YuBhay.Mush05.RedA.02.I11
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 221209
Completion Status Complete
IMG Completion Date 2019-12-08
PI Devaki Bhaya
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 177
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1662
Estimated Size 1503670
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-06-09
Last Modified By JGI automated process on 2019-11-13
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300035955
IMG RNA-Seq ID
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Phototrophic mat microbial and viral communities from various hot springs in Yellowstone National Park, Wyoming, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1253116 (Portal)
ITS Analysis Project Name Uncultured microbe JGI_YuBhay.Mush05.RedA.02.I11
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS NCBI Taxon ID
ITS Version Number

 

 

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