Studies
|
56,334 |
|
Biosamples
|
196,986 |
|
Sequencing Projects
|
525,358 |
|
Analysis Projects
|
385,429 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0393038 |
| Analysis Project Name |
Anaerolineaceae bacterium DeMMO6_46 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome-Assembled Genome |
|
IMG Submission ID
|
214468 |
|
NCBI BioProject Accession
|
|
|
NCBI BioSample Accession
|
|
| Completion Status |
Complete |
|
IMG Completion Date
|
2019-07-08 |
| PI | Magdalena Osburn |
|
Analysis Project Description
|
Metagenome assembled genome from microbial DNA extracted from 10L of subsurface aquifer fluids collected 4850 feet below surface. |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
| GOLD Organism Name |
Anaerolineaceae bacterium DeMMO6_46 |
|
NCBI Taxonomy ID
|
292628 |
| Phylum | CHLOROFLEXOTA |
| Phylogeny Suggestion |
|
|
Genus
|
|
| Species |
Anaerolineaceae bacterium DeMMO6_46 |
| Strain |
DeMMO6_46 |
| Domain |
BACTERIAL |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
|
Number of tRNAs
|
|
|
tRNA Software
|
|
|
Completeness Strategy
|
|
|
Scaffold Count
|
243 |
|
Contig Count
|
|
|
Binning Method
|
MetaBat2 |
|
Binning Parameters
|
|
|
Reassembly Attempted
|
|
|
MAG Coverage Software
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
2327 |
| Estimated Size |
2321999 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Contamination Percentage |
|
| Completeness Percentage |
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.3 |
| Added By | Caitlin Casar on 2019-06-04 |
| Last Modified By | JGI automated process on 2021-08-17 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2829466238 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA |
| Source Analysis Project |
Terrestrial subsurface fluid microbial community from Deep Mine Microbial Observatory in Lead, South Dakota, USA - DeMMO6 |
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