ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0392363
Analysis Project Name Prefix Metatranscriptome of lab enriched marine microbial communities from Marineland, Florida, USA - SWP_R4_TP1
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 225685
Completion Status Complete
IMG Completion Date 2020-02-19
PI Thomas Bianchi
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
Scaffold Count 161697
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 212932
Estimated Size 101653949
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.11
Added By JGI automated process on 2019-05-23
Last Modified By JGI automated process on 2020-02-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037597
IMG RNA-Seq ID
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Coastal seawater microbial communities from Marineland, Florida, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1243374 (Portal)
ITS Analysis Project Name SWP_R4_TP1 metatranscriptome Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number

 

 

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