ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0377324
Analysis Project Name Prefix Enriched cells from non-planted soil in EcoFAB chamber, Walnut Creek, California, United States - BONCAT cells Soil RepB EcoBCT.Soil.5000.2.H5
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID 212172
Completion Status Complete
IMG Completion Date 2019-11-14
PI Trent Northen
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
Scaffold Count 527
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6581
Estimated Size 6435185
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2019-05-14
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300034801
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Enriched cells from switchgrass and soil in EcoFAB chamber, Walnut Creek, California, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1245774 (Portal)
ITS Analysis Project Name BONCAT cells Soil RepB EcoBCT.Soil.5000.2.H5
ITS Analysis Product Name Amplified, Targeted, Cell Enrichment
ITS Version Number 1

 

 

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