ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0376536
Analysis Project Name Prefix Metatranscriptome of methane-enriched sediment microbial communities from Lake Washington, WA, United States - HO-FL-1
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome mapping (self)
IMG Submission ID 218118
Completion Status Incomplete
IMG Completion Date
PI Ludmila Chistoserdova
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2019-05-02
Last Modified By JGI automated process on 2019-08-19
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID 9346
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from Lake Washington near Medina, WA, United States
Number of Projects 1
Reference Analysis Project Metatranscriptome of methane-enriched sediment microbial communities from Lake Washington, WA, United States - HO-FL-1 (Metagenome Metatranscriptome)
JGI INFORMATION
ITS Analysis Project ID 1241802 (Portal)
ITS Analysis Project Name HO-FL-1 Expression - Self
ITS Analysis Product Name Metagenome Metatranscriptome Expression - Self
ITS NCBI Taxon ID
ITS Version Number

 

 

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