ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0376425
Analysis Project Name Prefix Enriched cells from marin sediment in Little Sippewissett salt marsh, Falmouth, Massachusetts, United States - MMB.PSCntrl.SYBR.02.L4
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID 211207
Completion Status Complete
IMG Completion Date 2019-10-02
PI Roland Hatzenpichler
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 213
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1478
Estimated Size 1315582
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2019-05-02
Last Modified By JGI automated process on 2019-05-10
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300034508
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1233185 (Portal)
ITS Analysis Project Name Pseudomonas putida 10 cell sort MMB.PSCntrl.SYBR.02.L4
ITS Analysis Product Name Amplified, Targeted, Cell Enrichment
ITS NCBI Taxon ID
ITS Version Number

 

 

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