ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0374519
Analysis Project Name Metatranscriptome of soil microbial communities from Everglades Agricultural Area, Florida, United States - EAA2017_July_plot1_rep3 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of soil microbial communities from Everglades Agricultural Area, Florida, United States - EAA2017_July_plot1_rep3
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 218909
Completion Status Complete
IMG Completion Date 2019-12-26
PI Willm Martens-Habbena
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 685633
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 806845
Estimated Size 345664495
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.9
Added By JGI automated process on 2019-04-12
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300036890
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from Everglades Agricultural Area, Florida, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1228674 (Portal)
ITS Analysis Project Name EAA2017_July_plot1_rep3 metatranscriptome Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000949

 

 

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