ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0373719
Analysis Project Name Prefix Trichodesmium sp. ROT.47
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID 209277
NCBI BioProject Accession
NCBI BioSample Accession
Completion Status Complete
IMG Completion Date 2019-06-01
PI Martin Ostrowski
Analysis Project Description Trichodesmium sp. ROT.47
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Trichodesmium sp. ROT.47
NCBI Taxonomy ID 1207
Phylum CYANOBACTERIA
Phylogeny Suggestion d__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Trichodesmium;s__Trichodesmium erythraeum
Genus Trichodesmium
Species Trichodesmium sp. ROT.47
Strain ROT.47
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 1363
Contig Count 1363
Binning Method MetaBat, CONCOCT, Metawrap refiner
Binning Parameters
Reassembly Attempted
MAG Coverage Software
Gene Calling Method (MIGS-32)
Gene Count 4554
Estimated Size 5039933
Sequencing Depth (MIGS-31.1)
Contamination Percentage
Completeness Percentage
Annotation Pipeline IMG Annotation Pipeline v.5.0.0
Added By Martin Ostrowski on 2019-03-11
Last Modified By JGI automated process on 2019-04-14
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2821474806
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank Release Date
MAG Publication
ANALYSIS PROJECT COMPOSITION
Study Marine microbial communities from benthic and pelagic environments in Australia
Source Analysis Project Combined Assembly of marine microbial communities from pelagic environments in Australia

 

 

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