ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0373398
Analysis Project Name Prefix P4+WT+SM metagenomes combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 209392
Completion Status Complete
IMG Completion Date 2019-11-11
PI Steven W. Singer
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 260229
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 686899
Estimated Size 508512870
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.0
Added By JGI automated process on 2019-03-04
Last Modified By JGI automated process on 2019-05-05
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300033802
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 21
Number of Projects 21
Derived Analysis Projects (DAP) 114
JGI INFORMATION
ITS Analysis Project ID 1243429 (Portal)
ITS Analysis Project Name P4+WT+SM metagenomes combined assembly
ITS Analysis Product Name Combined Assembly
ITS Version Number

 

 

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