ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0373398
Analysis Project Name Prefix P4+WT+SM metagenomes combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 209392
Completion Status Complete
IMG Completion Date 2019-11-11
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 260229
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 684604
Estimated Size 508512870
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.0
Added By JGI automated process on 2019-03-04
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300033802
Genbank Accession
Genbank Release Date
Genome Publication
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 21
Number of Projects 21
Number of Related Analysis Projects 24
Derived Analysis Projects (DAP) 114
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1243429 (Portal)
ITS Analysis Project Name P4+WT+SM metagenomes combined assembly
ITS Analysis Product Name Combined Assembly
ITS Version Number 1

 

 

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