ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0373398
Analysis Project Name P4+WT+SM metagenomes combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 209392
Completion Status Complete
IMG Completion Date 2019-11-11
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 260229
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 684604
Estimated Size 508512870
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.0
Added By JGI automated process on 2019-03-04
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300033802
Genbank Accession
Genbank Release Date
Genome Publication
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 21
Number of Projects 21
Number of Related Analysis Projects 21
Derived Analysis Projects (DAP) 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1243429 (Portal)
ITS Analysis Project Name P4+WT+SM metagenomes combined assembly
ITS Analysis Product Name Combined Assembly
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000909

 

 

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