ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0373395
Analysis Project Name Prefix P4 metagenomes combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 209359
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession
Completion Status Complete
Completion Date 2019-06-28
PI Steven W. Singer
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 151490
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 380034
Estimated Size 276887170
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.0
Added By JGI automated process on 2019-03-04
Last Modified By JGI automated process on 2019-05-05
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300033750
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 3
Number of Projects 3
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1243423 (Portal)
ITS Analysis Project Name P4 metagenomes combined assembly
ITS Analysis Product Name Combined Assembly
ITS NCBI Taxon ID
ITS Version Number

 

 

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