ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0371407
Analysis Project Name Marine pelagic microbial communities from Tasman Sea - 102.100.100/35804
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Unknown
Analysis Project Description Assembly and annotation of public SRA data set.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Custom JGI assembly, Nielsen et. al.
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2019-02-10
Last Modified By
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
 
SRA Run Id SRR6403555  (Link to NCBI )
 
SRA Run Id SRR5914948  (Link to NCBI )
ANALYSIS PROJECT COMPOSITION
Study Marine microbial communities from benthic and pelagic environments in Australia
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0

 

 

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