ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0371364
Analysis Project Name Prefix Infant fecal microbial communities from premature female in Chicago, USA - carrol
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Description Assembly and annotation of public SRA data set.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Custom JGI assembly, Nielsen et. al.
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2019-02-10
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
 
SRA Run Id SRR492190
 
SRA Run Id SRR492191
 
SRA Run Id SRR492066
 
SRA Run Id SRR492187
 
SRA Run Id SRR492188
 
SRA Run Id SRR492185
 
SRA Run Id SRR492196
 
SRA Run Id SRR492065
 
SRA Run Id SRR492186
 
SRA Run Id SRR492197
 
SRA Run Id SRR492183
 
SRA Run Id SRR492194
 
SRA Run Id SRR492184
 
SRA Run Id SRR492195
 
SRA Run Id SRR492192
 
SRA Run Id SRR492182
 
SRA Run Id SRR492193
 
SRA Run Id SRR492189
ANALYSIS PROJECT COMPOSITION
Study Infant fecal microbial communities from premature female in Chicago, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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