ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0365407
Analysis Project Name Prefix Pseudomonas sp. RC10-4-2
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 210984
Completion Status Complete
IMG Completion Date 2019-05-29
PI Sarah Lebeis
PI Name
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 13
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6204
Estimated Size 6546098
Sequencing Depth (MIGS-31.1) 229x
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2019-01-18
Last Modified By JGI automated process on 2020-12-05
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2824570060
Genbank Accession
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Characterizing functional chemotaxis receptors in different root zones
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1232667 (Portal)
ITS Analysis Project Name Pseudomonas sp. RC10-4-2
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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