ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0365407
Analysis Project Name Pseudomonas sp. RC10-4-2
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 210984
Completion Status Complete
IMG Completion Date 2019-05-29
PI Sarah Lebeis
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 13
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6204
Estimated Size 6546098
Sequencing Depth (MIGS-31.1) 229x
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2019-01-18
Last Modified By JGI automated process on 2022-05-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2824570060
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Characterizing functional chemotaxis receptors in different root zones
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1232667 (Portal)
ITS Analysis Project Name Pseudomonas sp. RC10-4-2
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1
Library Names GHHCZ
JGI Award DOI 10.46936/10.25585/60001112

 

 

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