ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0365403
Analysis Project Name Prefix Agrobacterium sp. RC10-4-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 212467
Completion Status Complete
IMG Completion Date 2019-08-21
PI Sarah Lebeis
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 28
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5492
Estimated Size 5525147
Sequencing Depth (MIGS-31.1) 271x
Annotation Pipeline IMG Annotation Pipeline v.5.0.2
Added By JGI automated process on 2019-01-18
Last Modified By JGI automated process on 2020-12-05
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2833692911
Genbank Accession
Genbank ID JACJIT000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Characterizing functional chemotaxis receptors in different root zones
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1232659 (Portal)
ITS Analysis Project Name Agrobacterium sp. RC10-4-1
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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