ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0365385
Analysis Project Name Pantoea sp. AlfR5
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 210969
Completion Status Complete
IMG Completion Date 2019-05-29
PI Sarah Lebeis
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 14
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4293
Estimated Size 4467354
Sequencing Depth (MIGS-31.1) 335x
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2019-01-18
Last Modified By JGI automated process on 2022-02-20
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2824495342
Genbank Accession
Genbank ID JAASSA000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Characterizing functional chemotaxis receptors in different root zones
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1232623 (Portal)
ITS Analysis Project Name Pantoea sp. AlfR5
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1
Library Names GHHBP
JGI Award DOI 10.46936/10.25585/60001112

 

 

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