ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0364661
Analysis Project Name Metatranscriptome of Cow rumen rumen associated fungal communities from Illinois, USA - Cow Y-3 switchgrass (Eukaryote Community Metatranscriptome Expression - Other) (Mapping to IMG Taxon 3300031118)
Analysis Project Name Stem Metatranscriptome of Cow rumen rumen associated fungal communities from Illinois, USA - Cow Y-3 switchgrass
Analysis Project Name Suffix (Mapping to IMG Taxon 3300031118)
Analysis Project Type Metatranscriptome mapping (other)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Matthias Hess
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2019-01-17
Last Modified By JGI automated process on 2021-12-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Projects 1
Reference Analysis Project Coassembly of Cow X and Y Switchgrass
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1057077 (Portal)
ITS Analysis Project Name Cow rumen Metatranscriptome - Cow Y-3 switchgrass Mapping to Cow X and Y Switchgrass
ITS Analysis Product Name Eukaryote Community Metatranscriptome Expression - Other
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000804

 

 

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