ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0364659
Analysis Project Name Metatranscriptome of cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-3 rumen fluid (Metagenome Metatranscriptome Expression - Other) (Mapping to IMG Taxon 3300030773)
Analysis Project Name Stem Metatranscriptome of cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-3 rumen fluid
Analysis Project Name Suffix (Mapping to IMG Taxon 3300030773)
Analysis Project Type Metatranscriptome mapping (other)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Matthias Hess
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2019-01-17
Last Modified By JGI automated process on 2021-12-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Projects 1
Reference Analysis Project Coassembly of Cow Y Rumen Fluid
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1057075 (Portal)
ITS Analysis Project Name Cow rumen Metatranscriptome - Cow Y-3 rumen fluid Mapping to Cow Y Rumen Fluid
ITS Analysis Product Name Metagenome Metatranscriptome Expression - Other
ITS Version Number 1
Library Names
JGI Award DOI 10.46936/10.25585/60000804

 

 

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