ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0364659 |
Analysis Project Name |
Metatranscriptome of cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-3 rumen fluid (Metagenome Metatranscriptome Expression - Other) (Mapping to IMG Taxon 3300030773) |
Analysis Project Name Stem |
Metatranscriptome of cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-3 rumen fluid |
Analysis Project Name Suffix
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(Mapping to IMG Taxon 3300030773) |
Analysis Project Type
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Metatranscriptome mapping (other) |
IMG Submission ID
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Completion Status |
Incomplete |
IMG Completion Date
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PI | Matthias Hess |
Analysis Project Description
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Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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Scaffold Count
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Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
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Estimated Size |
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Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
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Added By | JGI automated process on 2019-01-17 |
Last Modified By | JGI automated process on 2021-12-08 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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IMG RNA-Seq ID |
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Genbank Accession
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Genbank Release Date |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis |
Number of Projects
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1 |
Reference Analysis Project |
Coassembly of Cow Y Rumen Fluid |
JGI INFORMATION | |
JGI Data Utilization Status
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Restricted |
ITS Analysis Project ID
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1057075 (Portal) |
ITS Analysis Project Name
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Cow rumen Metatranscriptome - Cow Y-3 rumen fluid Mapping to Cow Y Rumen Fluid |
ITS Analysis Product Name
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Metagenome Metatranscriptome Expression - Other |
ITS Version Number |
1 |
Library Names
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JGI Award DOI
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10.46936/10.25585/60000804 |
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