ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0364655
Analysis Project Name Prefix Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-2 switchgrass
Analysis Project Name Suffix (Mapping to IMG Taxon 3300030771)
Analysis Project Type Metatranscriptome mapping (other)
IMG Submission ID
Completion Status Incomplete
Completion Date
PI Matthias Hess
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2019-01-17
Last Modified By JGI automated process on 2019-05-05
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Projects 1
Reference Analysis Project Coassembly of Cow Y Switchgrass
JGI INFORMATION
ITS Analysis Project ID 1057071 (Portal)
ITS Analysis Project Name Cow rumen Metatranscriptome - Cow Y-2 switchgrass Mapping to Cow Y Switchgrass
ITS Analysis Product Name Metagenome Metatranscriptome Expression - Other
ITS NCBI Taxon ID
ITS Version Number

 

 

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