ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0352990
Analysis Project Name Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-3 corn stover (Eukaryote Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-3 corn stover
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 205948
Completion Status Complete
IMG Completion Date 2019-01-16
PI Matthias Hess
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) rnnotator v. 3.3.2
Scaffold Count 184807
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 190399
Estimated Size 114599683
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2019-01-10
Last Modified By JGI automated process on 2021-12-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300032719
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 7
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1044501 (Portal)
ITS Analysis Project Name AP Cow rumen Metatranscriptome - Cow Y-3 corn stover1401920896781
ITS Analysis Product Name Eukaryote Metatranscriptome
ITS Version Number 1
Library Names WHNH
JGI Award DOI