ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0352989
Analysis Project Name Prefix Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-2 switchgrass
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 205943
Completion Status Complete
IMG Completion Date 2019-01-16
PI Matthias Hess
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) rnnotator v. 3.3.2
Scaffold Count 131355
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 135956
Estimated Size 71223989
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2019-01-10
Last Modified By JGI automated process on 2019-09-30
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300032626
IMG RNA-Seq ID
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 7
JGI INFORMATION
ITS Analysis Project ID 1044498 (Portal)
ITS Analysis Project Name AP Cow rumen Metatranscriptome - Cow Y-2 switchgrass1401920896761
ITS Analysis Product Name Eukaryote Metatranscriptome
ITS Version Number

 

 

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