ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0341087
Analysis Project Name Prefix Pasteurella multocida 2267PM
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 232298
Completion Status Complete
IMG Completion Date 2020-05-13
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 45
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2328
Estimated Size 2381947
Sequencing Depth (MIGS-31.1) 19.48x
Annotation Pipeline IMG Annotation Pipeline v.5.0.15
Added By JGI automated process on 2019-01-03
Last Modified By JGI automated process on 2020-05-26
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2871329420
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID LQDI00000000 (GCA_001930065.1)
Release Date 2017-04-06
NCBI Genbank Version LQDI01
Genbank Release Date 2017-04-06
ANALYSIS PROJECT COMPOSITION
Study Bovine respiratory disease (BRD) relevant bacteria
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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