ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0340140
Analysis Project Name Prefix Pasteurella multocida 69APM
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 231532
Completion Status Complete
IMG Completion Date 2020-04-23
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 31
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2209
Estimated Size 2294116
Sequencing Depth (MIGS-31.1) 29.16x
Annotation Pipeline IMG Annotation Pipeline v.5.0.15
Added By JGI automated process on 2019-01-03
Last Modified By JGI automated process on 2020-05-04
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2869031336
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID LQGN00000000 (GCA_001931145.1)
Release Date 2017-04-06
NCBI Genbank Version LQGN01
Genbank Release Date 2017-04-06
ANALYSIS PROJECT COMPOSITION
Study Bovine respiratory disease (BRD) relevant bacteria
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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