ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0339247
Analysis Project Name Prefix Snodgrassella alvi A-1-12
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 221807
Completion Status Complete
IMG Completion Date 2019-10-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 58
Contig Count 58
Gene Calling Method (MIGS-32)
Gene Count 2334
Estimated Size 2502286
Sequencing Depth (MIGS-31.1) 33.0x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-01-01
Last Modified By JGI automated process on 2019-11-01
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2840748007
Genbank Accession
Genbank ID NAHB00000000 (GCA_002088735.1)
Release Date 2017-04-17
NCBI Genbank Version NAHB01
Assembly Accession GCA_002088735.1
Genbank Release Date 2017-04-17
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Snodgrassella alvi Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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