ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0338055
Analysis Project Name Prefix Histophilus somni 3275HS
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 224519
Completion Status Complete
IMG Completion Date 2019-12-17
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 77
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2233
Estimated Size 2256250
Sequencing Depth (MIGS-31.1) 29.64x
Annotation Pipeline IMG Annotation Pipeline v.5.0.9
Added By JGI automated process on 2018-12-28
Last Modified By JGI automated process on 2020-01-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2845787757
Genbank Accession
Genbank ID LQFS00000000 (GCA_001931295.1)
Release Date 2017-04-06
NCBI Genbank Version LQFS01
Genbank Release Date 2017-04-06
ANALYSIS PROJECT COMPOSITION
Study Bovine respiratory disease (BRD) relevant bacteria
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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