ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0336977
Analysis Project Name Prefix Snodgrassella alvi A3
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 225824
Completion Status Complete
IMG Completion Date 2020-01-09
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 109
Contig Count 109
Gene Calling Method (MIGS-32)
Gene Count 2232
Estimated Size 2428731
Sequencing Depth (MIGS-31.1) 19.0x
Annotation Pipeline IMG Annotation Pipeline v.5.0.9
Added By JGI automated process on 2018-12-25
Last Modified By JGI automated process on 2020-01-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2849411303
Genbank Accession
Genbank ID NAHE00000000 (GCA_002088455.1)
Release Date 2017-04-17
NCBI Genbank Version NAHE01
Assembly Accession GCA_002088455.1
Genbank Release Date 2017-04-17
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Snodgrassella alvi Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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