ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0326631
Analysis Project Name Soil microbial communities from Bohemian Forest, Czech Republic - CSI2 metaT (Metagenome Metatranscriptome) (v2)
Analysis Project Name Stem Soil microbial communities from Bohemian Forest, Czech Republic - CSI2 metaT
Analysis Project Name Suffix (v2)
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 203941
Completion Status Complete
IMG Completion Date 2018-12-07
PI Petr Baldrian
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 81891
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 88747
Estimated Size 37621988
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-11-28
Last Modified By JGI automated process on 2022-05-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300032072
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil, plant litter and rhizosphere microbial communities from European coniferous forests
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 3
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1234166 (Portal)
ITS Analysis Project Name CSI2 metatrancriptome Annotation(v2)
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 2
JGI Award DOI 10.46936/fics.proj.2016.49499/60006010

 

 

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